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Epidemiology of Respiratory Viruses Detected by Multiplex Real-time PCR in Hospitalized Patients with Lower Respiratory Tract Infections in Vietnam from 2020 to 2024
15 Tháng 06, 2026
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Epidemiology of Respiratory Viruses Detected by Multiplex Real-time PCR in Hospitalized
Patients with Lower Respiratory Tract Infections in Vietnam from 2020 to 2024

Huong Thien Pham1,2,3*, Van Hung Pham1,3, Nhu Hong Thi Tran1,3, Duy Khanh Tran1,3,
Thao Hanh Thi Nguyen 1,3, Quang Duy Ha1,3, Anh Hong Pham1,2,4
1Vietnam Research and Development Institute of Clinical Microbiology, Ho Chi Minh city 70000, Vietnam;
2Pham Ngoc Thach University of Medicine, Ho Chi Minh city 70000, Vietnam; 3NK-Biotek Co.

 

BACKGROUND
Respiratory tract infections (RTIs) remain a leading cause of global hospitalization and mortality. The COVID-19 pandemic significantly disrupted traditional viral circulation and seasonal patterns. Large-scale surveillance using advanced techniques, such as multiplex real-time PCR (MLP-rPCR), is essential for preventive strategies and antimicrobial stewardship.
AIMS OF THE STUDY
This study aimed to assess viral detection trends in hospitalized RTI cases in Vietnam from 2020 to 2024 and highlight the necessity of comprehensive molecular screening.
MATERIAL AND METHODS

We conducted a five-year retrospective analysis of 15,936 respiratory clinical samples from hospitalized patients. The workflow of viral detection using an in-house MLP-rPCR assay targeting 17 respiratory viruses is shown below.


CONCLUSIONS
This study demonstrates a significant shift in the respiratory viral circulation in Vietnam following the COVID-19 pandemic. MLP-rPCR is a practical and reliable tool for resource-limited settings. Routine molecular testing can enhance diagnostic accuracy, guide clinical management, and strengthen public health surveillance.

REFERENCES
  1. Ly, V.K.; Pham, V.H.; Van Ly, X.; Pham, P.M. Bacterial and viral co-infections in community-acquired pneumonia in adults: a prospective study of multiple hospital centers. MedPharmRes 2024, 8, 153–161. https://doi.org/10.32895/UMP.MPR.8.3.17.
  2. Tang, Z.; Fan, H.; Tian, Y.; Lv, Q. Epidemiological characteristics of six common respiratory pathogen infections in children. Microbiol. Spectr. 2025, 13, e0007925. https://doi.org/10.1128/spectrum.00079-25.
  3. Burk, M.; El-Kersh, K.; Saad, M.; Wiemken, T.; Ramirez, J.; Cavallazzi, R. Viral infection in community-acquired pneumonia: a systematic review and meta-analysis. Eur. Respir. Rev. 2016, 25, 178–188.

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